Materials

Selected public code, teaching materials, reproducible analyses, and project artifacts. The curated list below is static; the live GitHub index appears afterward when JavaScript is available.

Reproducible Research Code

Hypercapnic Respiratory Failure Case Definitions

Analysis code supporting EHR case-definition comparisons for hypercapnic respiratory failure.

Reproducible analysis / Stata / Related work: The Consistency of Hypercapnic Respiratory Failure Case Definitions in Electronic Health Record Data

Transcutaneous CO2 Accuracy

Code for simulation and analysis of transcutaneous CO2 sensor performance.

Reproducible analysis / Python / Related work: Transcutaneous CO2 sensor performance work

Hypercapnia Trial Adverse Events

Notebook-based analysis of hypercapnia reporting as an adverse event in clinical trials.

Reproducible analysis / Jupyter Notebook / Related work: Hypercapnic respiratory failure adverse-event reporting abstract

Hickam's Dictum

Code and data needed to reproduce the main analyses and figures for the multiple-diagnosis analysis.

Reproducible analysis / Stata / Related work: Hickam's Dictum: An Analysis of Multiple Diagnoses

Weight Loss and OSA Meta-analysis

Supporting code and extraction tables for the systematic review, meta-analysis, and meta-regression.

Reproducible analysis / Stata / Related work: The association of weight loss from anti-obesity medications or bariatric surgery and apnea-hypopnea index in obstructive sleep apnea

Immersive Virtual Reality in the ICU

Code and materials for the mixed-methods ICU virtual-reality feasibility study.

Reproducible analysis / Stata / Related work: Immersive Virtual Reality Use in Medical Intensive Care

Teaching and Methods Resources

Diagnostic Reasoning Notebooks

Interactive notebooks for teaching likelihood ratios, Bayesian updating, and diagnostic reasoning.

Teaching / Jupyter Notebook

Project Artifacts

Live GitHub Index

The live index loads public repositories from GitHub, sorted by recent updates. Forks are excluded by default.

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